Aliases : ARS27A, RS27A
Description : component *(eS27) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g40961 | |
Cluster | HCCA: Cluster_139 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G47930 | No alias | Zinc-binding ribosomal protein family protein | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0004.g008655 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g12663 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.05G019300.1 | ARS27A, RS27A,... | component *(eS27) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g529400 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g17983 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g00057 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01001113001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g09510.1 | No alias | component RPS27 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Pir_g58415 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_15840V3.1 | Pp3c1_15840 | ribosomal protein S27 | 0.04 | OrthoFinder output from all 47 species | |
Pp3c2_20540V3.1 | ARS27A, RS27A,... | ribosomal protein S27 | 0.02 | OrthoFinder output from all 47 species | |
Smo163947 | ARS27A, RS27A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g068710.3.1 | ARS27A, RS27A,... | component RPS27 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Spa_g16488 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g53353 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0017182 | peptidyl-diphthamide metabolic process | IEP | HCCA |
BP | GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018202 | peptidyl-histidine modification | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0090560 | 2-(3-amino-3-carboxypropyl)histidine synthase activity | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1900247 | regulation of cytoplasmic translational elongation | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000592 | Ribosomal_S27 | 67 | 121 |
No external refs found! |