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  5. Gb_08070

Gb_08070


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 691.0)


Gene families : OG_01_0010436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010436_tree ,
OG_02_0012850 (LandPlants) Phylogenetic Tree(s): OG_02_0012850_tree ,
OG_03_0015051 (SeedPlants) Phylogenetic Tree(s): OG_03_0015051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08070
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_99947g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
AMTR_s00051p00085060 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g16610... 0.03 LandPlants
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
Solyc05g012630.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 SeedPlants
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
Solyc05g012630.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 643 666
IPR032867 DYW_dom 741 865
IPR002885 Pentatricopeptide_repeat 265 313
IPR002885 Pentatricopeptide_repeat 568 615
IPR002885 Pentatricopeptide_repeat 164 212
IPR002885 Pentatricopeptide_repeat 366 414
IPR002885 Pentatricopeptide_repeat 467 515
No external refs found!