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Gb_08065


Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana (sp|q7y211|pp285_arath : 675.0)


Gene families : OG_01_0030753 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0021971 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0026959 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08065
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
MA_114242g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
GSVIVT01024233001 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 LandPlants
MA_114242g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 LandPlants
MA_114242g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 223
IPR002885 Pentatricopeptide_repeat 601 626
IPR002885 Pentatricopeptide_repeat 501 526
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 325 372
IPR002885 Pentatricopeptide_repeat 426 469
IPR032867 DYW_dom 700 824
No external refs found!