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  5. Lfl_g40852

Lfl_g40852 (GAMMA-H2AX, H2AXB,...)


Aliases : GAMMA-H2AX, H2AXB, HTA3, G-H2AX

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40852
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Adi_g011159 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06706 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25942 No alias histone (H2A) 0.04 OrthoFinder output from all 47 species
MA_9379473g0010 HTA2 histone (H2A) 0.03 OrthoFinder output from all 47 species
Ore_g19378 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06670 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58974 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 34 115
IPR032454 Histone_H2A_C 118 151
No external refs found!