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  5. Gb_07993

Gb_07993


Description : WTF1 plastidial RNA basal splicing factor


Gene families : OG_01_0001104 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001104_tree ,
OG_02_0001147 (LandPlants) Phylogenetic Tree(s): OG_02_0001147_tree ,
OG_03_0002903 (SeedPlants) Phylogenetic Tree(s): OG_03_0002903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07993
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
AT4G01037 WTF1, AtWTF1 Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Archaeplastida
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
Pp3c18_21300V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Archaeplastida
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.04 Archaeplastida
Smo98802 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida
AT4G01037 WTF1, AtWTF1 Ubiquitin carboxyl-terminal hydrolase family protein 0.02 LandPlants
GSVIVT01027077001 No alias RNA processing.organelle machineries.RNA... 0.04 LandPlants
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 LandPlants
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.04 LandPlants
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 LandPlants
Zm00001e000591_P002 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 LandPlants
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.05 LandPlants
GSVIVT01027077001 No alias RNA processing.organelle machineries.RNA... 0.03 SeedPlants
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 SeedPlants
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.04 SeedPlants
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 SeedPlants
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.01 SeedPlants
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021099 PORR_domain 93 422
No external refs found!