MA_30120g0010


Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_30120g0010
Cluster HCCA cluster: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.03 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT2G40350 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01017542001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os07g47790 Os07g0674800 No description available 0.03 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.02 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_9260020g0010 No alias No description available 0.03 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc03g116610.3.1 Solyc03g116610.3 No description available 0.02 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d009573 GRMZM2G021790 No description available 0.03 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d024436 GRMZM2G055070 No description available 0.02 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.02 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d034605 GRMZM2G009598 No description available 0.03 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.03 Gene family
Zm00001d044857 GRMZM5G852704 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 34 83
No external refs found!