MA_29857g0020

Description : 34.2 transport.sugars organic cation/carnitine transporter1 (1-Oct)

Gene families : OG_01_0001622 (Gene family) Phylogenetic Tree(s): OG0001622_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): MA_29857g0020
Cluster	HCCA cluster: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AT1G79410	AtOCT5, 5-Oct	organic cation/carnitine transporter5	0.03	Gene family
LOC_Os07g37454	Os07g0561800	34.99 transport.misc organic cation/carnitine...	0.02	Gene family
MA_29857g0010	No alias	34.2 transport.sugars organic cation/carnitine...	0.06	Gene family
Solyc08g081090.1.1	Solyc08g081090.1	34.14 transport.unspecified cations organic...	0.03	Gene family
Zm00001d047222	GRMZM2G076268	34.99 transport.misc organic cation/carnitine...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan
MF	GO:0022857	transmembrane transporter activity	IEA	InterProScan
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005828	MFS_sugar_transport-like	51	433

External Links

No external refs found!