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  5. Lfl_g40550

Lfl_g40550 (AtOCT4, 4-Oct)


Aliases : AtOCT4, 4-Oct

Description : organic cation transporter *(OCT) & original description: none


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40550

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00167630 AtOCT1, 1-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00186620 3-Oct, ATOCT3,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013156 AtOCT4, 4-Oct organic cation transporter *(OCT) & original... 0.04 OrthoFinder output from all 47 species
Ceric.11G036300.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01036714001 3-Oct, ATOCT3 Solute transport.carrier-mediated transport.MFS... 0.07 OrthoFinder output from all 47 species
Len_g08973 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31029 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436973g0010 AtOCT1, 1-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Ppi_g15859 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011701 MFS 528 679
IPR005828 MFS_sugar_transport-like 174 352
No external refs found!