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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g40549 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00172890 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G72200 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G76410 | ATL8 | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G17600 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g13717 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14419 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30397 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g60107 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30805.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0030.g024239 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g035118 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g035127 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0079.g038347 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043291 | No alias | not classified & original description: CDS=1-675 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g31712 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083000.1 | Ceric.09G083000 | not classified & original description: pacid=50588443... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G027700.1 | Ceric.10G027700 | not classified & original description: pacid=50612217... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G057600.1 | Ceric.13G057600 | not classified & original description: pacid=50636796... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G001000.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G001100.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G061800.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G061900.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10168 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14773 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g41851 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g49887 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g01188 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g28199 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015682001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36232 | No alias | IDF1 iron uptake IRT1-ubiquitin ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49550.1 | RHA3A, LOC_Os04g49550 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g20892 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_61738g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_9989900g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g20433 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38764 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17181 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06948 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17146 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20730 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30955 | XERICO | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g44046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g50189 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c23_1651V3.1 | Pp3c23_1651 | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000797 | ATL8 | not classified & original description: CDS=1-573 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013072 | ATL8 | not classified & original description: CDS=1-573 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0138.g022556 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0146.g023101 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g45850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g088450.2.1 | Solyc01g088450 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g009780.1.1 | Solyc04g009780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26214 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007103_P001 | Zm00001e007103 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010029_P001 | XERICO, Zm00001e010029 | ubiquitin protein ligase (XERICO) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015445_P001 | BRH1, Zm00001e015445 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| BP | GO:0016559 | peroxisome fission | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031903 | microbody membrane | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0042579 | microbody | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0048285 | organelle fission | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |