Gb_07643


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 416.0)


Gene families : OG_01_0000054 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000054_tree ,
OG_02_0003310 (LandPlants) Phylogenetic Tree(s): OG_02_0003310_tree ,
OG_03_0002023 (SeedPlants) Phylogenetic Tree(s): OG_03_0002023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07643
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT4G23160 CRK8 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 Archaeplastida
GSVIVT01024357001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_03159 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_07443 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_21082 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_37914 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_40208 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 LandPlants
Gb_40208 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 SeedPlants

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 611 726
IPR013103 RVT_2 964 1206
IPR025724 GAG-pre-integrase_dom 549 597
No external refs found!