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  5. Lfl_g40373

Lfl_g40373 (UBP12)


Aliases : UBP12

Description : deubiquitinase *(UBP12-13) & original description: none


Gene families : OG0001048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40373

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00140970 UBP13,... Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G06600 UBP12 ubiquitin-specific protease 12 0.06 OrthoFinder output from all 47 species
Adi_g022336 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076953 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06794 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21287 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16236 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19646 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g05134 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.11 OrthoFinder output from all 47 species
Als_g11910 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g18908 UBP13 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g29323 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32969 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g04496 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g20270 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12303 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13913.t1 UBP12, Aspi01Gene13913 deubiquitinase *(UBP12-13) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19498.t1 UBP13, Aspi01Gene19498 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53263.t2 UBP12, Aspi01Gene53263 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014866 UBP12 deubiquitinase *(UBP12-13) & original description: CDS=40-3402 0.05 OrthoFinder output from all 47 species
Cba_g16252 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g17070 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32622 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76845 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G025300.1 UBP13, Ceric.13G025300 deubiquitinase *(UBP12-13) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.14G040100.1 UBP12, Ceric.14G040100 deubiquitinase *(UBP12-13) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G037500.1 UBP12, Ceric.24G037500 deubiquitinase *(UBP12-13) & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.29 UBP13 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.30 UBP12 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Cre07.g336200 UBP12 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g06495 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08947 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g46962 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g50110 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g08217 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25656 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18754 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022498001 UBP12 Protein degradation.peptidase families.cysteine-type... 0.06 OrthoFinder output from all 47 species
GSVIVT01034603001 UBP12 Protein degradation.peptidase families.cysteine-type... 0.08 OrthoFinder output from all 47 species
GSVIVT01037528001 UBP12 Protein degradation.peptidase families.cysteine-type... 0.06 OrthoFinder output from all 47 species
LOC_Os01g56490.1 UBP13, LOC_Os01g56490 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 OrthoFinder output from all 47 species
LOC_Os11g36470.1 UBP13, LOC_Os11g36470 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 OrthoFinder output from all 47 species
LOC_Os12g30540.1 UBP12, LOC_Os12g30540 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.07 OrthoFinder output from all 47 species
Len_g23299 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426331g0010 UBP12 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 OrthoFinder output from all 47 species
MA_10427483g0010 UBP12 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 OrthoFinder output from all 47 species
MA_10427483g0020 UBP13 deubiquitinase (UBP12-13) 0.03 OrthoFinder output from all 47 species
MA_32639g0010 UBP12 ubiquitin protease (USP7) 0.04 OrthoFinder output from all 47 species
MA_75085g0010 UBP13 deubiquitinase (UBP12-13) 0.03 OrthoFinder output from all 47 species
Mp3g15430.1 UBP12 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.08 OrthoFinder output from all 47 species
Msp_g15171 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43590 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28804 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g40484 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g48499 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16380 UBP13 deubiquitinase *(UBP12-13) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16929 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27527 No alias deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Smo444302 UBP12 Protein degradation.peptidase families.cysteine-type... 0.06 OrthoFinder output from all 47 species
Solyc05g055090.4.1 UBP12, Solyc05g055090 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.1 OrthoFinder output from all 47 species
Solyc10g081610.2.1 UBP12, Solyc10g081610 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.1 OrthoFinder output from all 47 species
Solyc11g006320.2.1 UBP12, Solyc11g006320 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 OrthoFinder output from all 47 species
Solyc11g071700.2.1 UBP12, Solyc11g071700 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.06 OrthoFinder output from all 47 species
Spa_g06287 UBP12 deubiquitinase *(UBP12-13) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017788_P001 UBP12, Zm00001e017788 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.15 OrthoFinder output from all 47 species
Zm00001e024432_P001 UBP12, Zm00001e024432 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 OrthoFinder output from all 47 species
Zm00001e032871_P004 UBP12, Zm00001e032871 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 OrthoFinder output from all 47 species
Zm00001e039540_P003 UBP12, Zm00001e039540 ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 57 176
IPR001394 Peptidase_C19_UCH 194 515
IPR024729 USP7_ICP0-binding_dom 619 872
IPR029346 USP_C 887 1097
No external refs found!