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  5. Gb_07465

Gb_07465


Description : Chitinase 4 OS=Oryza sativa subsp. japonica (sp|o04138|chi4_orysj : 232.0)


Gene families : OG_01_0000104 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000104_tree ,
OG_02_0000272 (LandPlants) Phylogenetic Tree(s): OG_02_0000272_tree ,
OG_03_0017886 (SeedPlants) Phylogenetic Tree(s): OG_03_0017886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07465
Cluster HCCA: Cluster_483

Target Alias Description ECC score Gene Family Method Actions
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g39330.1 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g41620.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g41640.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g51050.1 No alias Chitinase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g41100.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_10313114g0010 No alias Endochitinase B OS=Nicotiana tabacum... 0.07 Archaeplastida
MA_159244g0020 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 251.0) 0.03 Archaeplastida
MA_18470g0020 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.02 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_44734g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp2g21810.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Mp4g01780.1 No alias Endochitinase CH5B OS=Phaseolus vulgaris... 0.03 Archaeplastida
Mp4g04430.1 No alias no description available(sp|q949h3|chi1_hevbr : 210.0) 0.02 Archaeplastida
Mp4g20470.1 No alias Basic endochitinase B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.01 Archaeplastida
Solyc02g082920.4.1 No alias Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.03 Archaeplastida
Solyc02g082930.3.1 No alias Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g055810.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc10g074440.2.1 No alias Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.02 Archaeplastida
Solyc12g098810.2.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Zm00001e000271_P001 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e007715_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.03 Archaeplastida
Zm00001e013318_P001 No alias Chitinase 9 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
AMTR_s00066p00199730 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01038120001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.01 LandPlants
LOC_Os04g41620.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 LandPlants
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 LandPlants
MA_159244g0020 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 251.0) 0.03 LandPlants
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 LandPlants
MA_44734g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 LandPlants
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e007715_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.03 LandPlants
Zm00001e007716_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.01 LandPlants

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 34 63
IPR000726 Glyco_hydro_19_cat 210 246
IPR000726 Glyco_hydro_19_cat 74 190
No external refs found!