Gb_07435


Description : alpha-class expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07435
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g14650.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.01 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp3g10120.1 No alias alpha-class expansin 0.01 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c18_19690V3.1 No alias expansin A16 0.05 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.01 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.01 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.04 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.01 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.01 LandPlants
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.01 LandPlants
AT2G40610 EXPA8, ATHEXP... expansin A8 0.01 LandPlants
AT3G29030 EXP5, ATHEXP... expansin A5 0.02 LandPlants
AT5G05290 EXPA2, ATHEXP... expansin A2 0.02 LandPlants
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.01 LandPlants
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 LandPlants
Gb_06139 No alias alpha-class expansin 0.03 LandPlants
LOC_Os01g14650.1 No alias alpha-class expansin 0.03 LandPlants
MA_30127g0010 No alias alpha-class expansin 0.01 LandPlants
MA_36587g0010 No alias alpha-class expansin 0.01 LandPlants
MA_474624g0010 No alias alpha-class expansin 0.02 LandPlants
MA_915221g0010 No alias alpha-class expansin 0.01 LandPlants
Mp1g24230.1 No alias alpha-class expansin 0.03 LandPlants
Mp1g26350.1 No alias alpha-class expansin 0.01 LandPlants
Pp3c12_4560V3.1 No alias expansin A9 0.02 LandPlants
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 LandPlants
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Solyc04g081870.4.1 No alias alpha-class expansin 0.04 LandPlants
Solyc05g052250.3.1 No alias alpha-class expansin 0.01 LandPlants
Solyc12g089380.2.1 No alias alpha-class expansin 0.01 LandPlants
Zm00001e000429_P001 No alias alpha-class expansin 0.01 LandPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.01 LandPlants
Zm00001e017334_P001 No alias alpha-class expansin 0.01 LandPlants
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 SeedPlants
MA_30127g0010 No alias alpha-class expansin 0.01 SeedPlants
MA_36587g0010 No alias alpha-class expansin 0.01 SeedPlants
MA_474624g0010 No alias alpha-class expansin 0.02 SeedPlants
Solyc05g052250.3.1 No alias alpha-class expansin 0.01 SeedPlants
Solyc12g089380.2.1 No alias alpha-class expansin 0.01 SeedPlants
Zm00001e000429_P001 No alias alpha-class expansin 0.01 SeedPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.01 SeedPlants
Zm00001e017334_P001 No alias alpha-class expansin 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 147 224
IPR009009 RlpA-like_DPBB 51 135
No external refs found!