MA_28768g0010


Description : 16.10 secondary metabolism.simple phenols Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype. IRREGULAR XYLEM 12 (IRX12)


Gene families : OG_01_0000098 (Gene family) Phylogenetic Tree(s): OG0000098_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_28768g0010
Cluster HCCA cluster: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT2G30210 LAC3 laccase 3 0.02 Gene family
AT2G40370 LAC5 laccase 5 0.02 Gene family
AT5G01190 LAC10 laccase 10 0.02 Gene family
AT5G48100 TT10, LAC15, ATLAC15 Laccase/Diphenol oxidase family protein 0.02 Gene family
GSVIVT01001223001 No alias 16.10 secondary metabolism.simple phenols Encodes a... 0.02 Gene family
GSVIVT01001604001 No alias 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
GSVIVT01001614001 No alias 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
GSVIVT01012343001 No alias 16.10 secondary metabolism.simple phenols putative... 0.03 Gene family
GSVIVT01032744001 No alias 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
GSVIVT01034138001 No alias 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
GSVIVT01034842001 No alias 16.10 secondary metabolism.simple phenols Encodes a... 0.03 Gene family
LOC_Os01g61160 Os01g0827300 16.10 secondary metabolism.simple phenols putative... 0.03 Gene family
LOC_Os11g47390 Os11g0696900 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
LOC_Os12g15680 Os12g0258700 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
LOC_Os12g15920 Os12g0259800 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
MA_10434864g0010 No alias 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
MA_170004g0010 No alias 16.10 secondary metabolism.simple phenols putative... 0.04 Gene family
MA_213397g0020 No alias 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
MA_66348g0010 No alias 16.10 secondary metabolism.simple phenols putative... 0.04 Gene family
Smo105894 PACid_15418074 No description available 0.03 Gene family
Smo404075 PACid_15407082 No description available 0.01 Gene family
Smo404333 PACid_15409398 No description available 0.02 Gene family
Smo78002 PACid_15418410 No description available 0.02 Gene family
Solyc02g085120.3.1 Solyc02g085120.3 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
Solyc06g048860.2.1 Solyc06g048860.2 16.10 secondary metabolism.simple phenols putative... 0.05 Gene family
Solyc06g050530.3.1 Solyc06g050530.3 16.10 secondary metabolism.simple phenols putative... 0.04 Gene family
Zm00001d007653 GRMZM2G166857 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
Zm00001d012477 GRMZM2G336337 16.10 secondary metabolism.simple phenols putative... 0.04 Gene family
Zm00001d043019 GRMZM2G132169 16.10 secondary metabolism.simple phenols putative... 0.03 Gene family
Zm00001d049085 GRMZM2G309594 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family
Zm00001d052324 GRMZM2G388587 16.10 secondary metabolism.simple phenols putative... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 422 549
IPR011707 Cu-oxidase_3 40 153
IPR001117 Cu-oxidase 165 316
No external refs found!