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  5. Lfl_g40177

Lfl_g40177


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00090010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.01 OrthoFinder output from all 47 species
Adi_g002869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072972 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086714 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g26670 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34218 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16779 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03152.t1 Aspi01Gene03152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22967.t2 Aspi01Gene22967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51368.t2 CRR22, Aspi01Gene51368 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18562 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19795 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G019700.1 Ceric.23G019700 not classified & original description: pacid=50611424... 0.02 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.01 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14779 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48675 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.01 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Len_g18273 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06666 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_175623g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g44930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45751 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55456 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.01 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.01 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 170 218
IPR002885 Pentatricopeptide_repeat 575 622
IPR002885 Pentatricopeptide_repeat 271 318
IPR002885 Pentatricopeptide_repeat 676 722
IPR002885 Pentatricopeptide_repeat 472 519
IPR002885 Pentatricopeptide_repeat 650 671
IPR002885 Pentatricopeptide_repeat 145 166
IPR002885 Pentatricopeptide_repeat 347 366
IPR002885 Pentatricopeptide_repeat 246 268
IPR002885 Pentatricopeptide_repeat 73 101
IPR002885 Pentatricopeptide_repeat 750 774
IPR002885 Pentatricopeptide_repeat 373 421
No external refs found!