Gb_07283


Description : Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana (sp|q8rws8|pp199_arath : 651.0)


Gene families : OG_01_0007624 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007624_tree ,
OG_02_0006946 (LandPlants) Phylogenetic Tree(s): OG_02_0006946_tree ,
OG_03_0006926 (SeedPlants) Phylogenetic Tree(s): OG_03_0006926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07283
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.03 Archaeplastida
AT2G41720 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
GSVIVT01033271001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.03 Archaeplastida
Pp3c2_1940V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 Archaeplastida
Zm00001e035316_P001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 Archaeplastida
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.02 LandPlants
AT2G41720 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 LandPlants
GSVIVT01033271001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.03 LandPlants
Pp3c2_1940V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 LandPlants
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 LandPlants
Zm00001e035316_P001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 LandPlants
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.02 SeedPlants
AT2G41720 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 SeedPlants
GSVIVT01033271001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.03 SeedPlants
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 SeedPlants
Zm00001e035316_P001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 372 429
IPR002885 Pentatricopeptide_repeat 451 497
IPR002885 Pentatricopeptide_repeat 202 249
IPR002885 Pentatricopeptide_repeat 272 321
IPR002885 Pentatricopeptide_repeat 592 637
IPR002885 Pentatricopeptide_repeat 521 569
IPR002885 Pentatricopeptide_repeat 171 200
No external refs found!