MA_279935g0010


Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. SU(VAR)3-9 homolog 9 (SUVH9)


Gene families : OG_01_0000166 (Gene family) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_279935g0010
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G17770 SDG17, SUVH7 SU(VAR)3-9 homolog 7 0.02 Gene family
GSVIVT01001083001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA InterProScan
BP GO:0034968 histone lysine methylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003105 SRA_YDG 115 268
IPR007728 Pre-SET_dom 298 395
No external refs found!