Lfl_g39767


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39767

Target Alias Description ECC score Gene Family Method Actions
AT5G01660 No alias CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,... 0.02 OrthoFinder output from all 47 species
Adi_g007845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g122099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12260.1 LOC_Os06g12260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g01714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g050610.3.1 Solyc06g050610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.02 OrthoFinder output from all 47 species
Spa_g08117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 28 158
No external refs found!