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  5. Lfl_g39596

Lfl_g39596 (TIL1, POL2A, ABO4,...)


Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529

Description : catalytic component *(POL2/POLE1) of DNA polymerase epsilon complex & original description: none


Gene families : OG0002444 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39596

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.01 OrthoFinder output from all 39 species
Als_g16530 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.02 OrthoFinder output from all 39 species
Ceric.10G003400.1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.02 OrthoFinder output from all 39 species
Dac_g06701 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.01 OrthoFinder output from all 39 species
Dcu_g42121 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.01 OrthoFinder output from all 39 species
Gb_06608 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.01 OrthoFinder output from all 39 species
Nbi_g08627 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.02 OrthoFinder output from all 39 species
Smo442263 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.01 OrthoFinder output from all 39 species
Spa_g06995 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.01 OrthoFinder output from all 39 species
Tin_g44285 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.02 OrthoFinder output from all 39 species
Zm00001e014636_P002 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR013697 DNA_pol_e_suA_C 1585 1952
IPR006133 DNA-dir_DNA_pol_B_exonuc 116 446
IPR006134 DNA-dir_DNA_pol_B_multi_dom 812 1115
No external refs found!