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  5. Lfl_g39579

Lfl_g39579


Description : not classified & original description: none


Gene families : OG0003007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39579

Target Alias Description ECC score Gene Family Method Actions
Aob_g02208 VIP5 component *(VIP5/RTF1) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Cre03.g196450 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Ore_g21422 VIP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23255 VIP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01016 VIP5 component *(VIP5/RTF1) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Solyc02g078580.1.1 VIP5, Solyc02g078580 component VIP5/RTF1 of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Spa_g54681 VIP5 component *(VIP5/RTF1) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!