Gb_06558


Description : no hits & (original description: none)


Gene families : OG_01_0009437 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009437_tree ,
OG_02_0000792 (LandPlants) Phylogenetic Tree(s): OG_02_0000792_tree ,
OG_03_0000382 (SeedPlants) Phylogenetic Tree(s): OG_03_0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06558
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Gb_11479 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_16329 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_18698 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_18706 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_36846 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_00243 No alias no hits & (original description: none) 0.05 LandPlants
Gb_11479 No alias no hits & (original description: none) 0.07 LandPlants
Gb_13529 No alias no hits & (original description: none) 0.08 LandPlants
Gb_14600 No alias no hits & (original description: none) 0.06 LandPlants
Gb_17747 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 LandPlants
Gb_18633 No alias no hits & (original description: none) 0.12 LandPlants
Gb_18698 No alias no hits & (original description: none) 0.04 LandPlants
Gb_18701 No alias no hits & (original description: none) 0.04 LandPlants
Gb_18706 No alias no hits & (original description: none) 0.05 LandPlants
Gb_20037 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 LandPlants
Gb_20044 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 LandPlants
Gb_28824 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 LandPlants
Gb_00243 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_11479 No alias no hits & (original description: none) 0.07 SeedPlants
Gb_13529 No alias no hits & (original description: none) 0.08 SeedPlants
Gb_17747 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 SeedPlants
Gb_18633 No alias no hits & (original description: none) 0.12 SeedPlants
Gb_18698 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_18701 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_18706 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_20037 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 SeedPlants
Gb_20044 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 SeedPlants

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 71 177
IPR041588 Integrase_H2C2 6 57
No external refs found!