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  5. Lfl_g39356

Lfl_g39356 (AtOCT4, 4-Oct)


Aliases : AtOCT4, 4-Oct

Description : organic cation transporter *(OCT) & original description: none


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39356

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00186620 3-Oct, ATOCT3,... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AMTR_s00043p00126560 AtOCT4, 4-Oct,... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Ala_g18655 AtOCT4, 4-Oct not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58798.t1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g53930.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Ore_g31037 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17192 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g053860.4.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Solyc07g063920.3.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Tin_g41783 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 439 643
IPR005828 MFS_sugar_transport-like 147 315
No external refs found!