MA_25515g0010


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_25515g0010
Cluster HCCA cluster: Cluster_623

Target Alias Description ECC score Gene Family Method Actions
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT5G13230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01010654001 No alias No description available 0.03 Gene family
GSVIVT01015325001 No alias No description available 0.04 Gene family
GSVIVT01017378001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01031266001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01035618001 No alias No description available 0.03 Gene family
GSVIVT01036943001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01037332001 No alias No description available 0.02 Gene family
LOC_Os07g39090 Os07g0578800,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
MA_57048g0010 No alias No description available 0.02 Gene family
Smo90563 PACid_15413443 No description available 0.02 Gene family
Solyc01g095690.2.1 Solyc01g095690.2 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 312 336
IPR002885 Pentatricopeptide_repeat 208 236
IPR002885 Pentatricopeptide_repeat 79 104
IPR002885 Pentatricopeptide_repeat 180 206
IPR002885 Pentatricopeptide_repeat 715 739
IPR002885 Pentatricopeptide_repeat 540 583
IPR002885 Pentatricopeptide_repeat 338 385
IPR002885 Pentatricopeptide_repeat 105 153
IPR002885 Pentatricopeptide_repeat 640 687
IPR002885 Pentatricopeptide_repeat 237 283
IPR002885 Pentatricopeptide_repeat 439 487
IPR032867 DYW_dom 814 938
No external refs found!