AMTR_s00033p00221750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.202

Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana


Gene families : OG_01_0000393 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000393_tree ,
OG_02_0000380 (LandPlants) Phylogenetic Tree(s): OG_02_0000380_tree ,
OG_03_0002279 (SeedPlants) Phylogenetic Tree(s): OG_03_0002279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00221750
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AT5G46190 No alias RNA-binding KH domain-containing protein 0.03 Archaeplastida
GSVIVT01018244001 No alias RNA-binding KH domain-containing protein PEPPER... 0.02 Archaeplastida
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.04 Archaeplastida
Gb_38220 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Solyc11g010840.2.1 No alias RNA-binding KH domain-containing protein RCF3... 0.05 Archaeplastida
AT2G03110 No alias RNA binding;nucleic acid binding 0.02 LandPlants
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
Gb_38220 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
Zm00001e030716_P002 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
Zm00001e037033_P001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 565 626
IPR004088 KH_dom_type_1 376 436
IPR004088 KH_dom_type_1 133 196
IPR004088 KH_dom_type_1 297 335
IPR004088 KH_dom_type_1 53 92
No external refs found!