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  5. Lfl_g38604

Lfl_g38604 (PRH75)


Aliases : PRH75

Description : not classified & original description: none


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g38604

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00127820 PMH2, ATRH53,... RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
Ala_g14243 PRH75 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23186 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Aob_g09620 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07520 emb1138 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02286 PRH75 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g08101 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21286 emb1138 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07831 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10087 PMH2, ATRH53 DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os07g05050.1 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species
Len_g18992 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06681 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
MA_17924g0010 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g01214 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10755 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13082 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Msp_g22012 emb1138 sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.02 OrthoFinder output from all 47 species
Nbi_g28749 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.04 OrthoFinder output from all 47 species
Ore_g07399 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Ore_g38810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03917 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43098 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26329 No alias group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g007010.4.1 PRH75, Solyc03g007010 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.02 OrthoFinder output from all 47 species
Solyc07g044760.3.1 PMH2, ATRH53,... RNA helicase (PMH) 0.04 OrthoFinder output from all 47 species
Spa_g06515 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Spa_g18181 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15128 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003219_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR012562 GUCT 554 657
IPR011545 DEAD/DEAH_box_helicase_dom 143 321
IPR001650 Helicase_C 368 464
No external refs found!