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  5. Cba_g78984

Cba_g78984 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : not classified & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g78984
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Als_g55405 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15210 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21918 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15847 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32714 NPQ4, PSBS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16538 NPQ4, PSBS not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g17059 NPQ4, PSBS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25149 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 20 89
No external refs found!