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  5. Lfl_g38544

Lfl_g38544


Description : not classified & original description: none


Gene families : OG0009011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g38544

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272590 evm_27.TU.AmTr_v1... Ribosomal protein S3, mitochondrial OS=Petunia hybrida 0.02 OrthoFinder output from all 47 species
ATMG00090 No alias structural constituent of ribosome;protein binding 0.04 OrthoFinder output from all 47 species
Aev_g20617 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g25281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18051 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g33316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G029400.1 Ceric.23G029400 not classified & original description: pacid=50610062... 0.04 OrthoFinder output from all 47 species
Cre11.g467702 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g51885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_13807 No alias Ribosomal protein S3, mitochondrial OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os12g34054.1 LOC_Os12g34054 component mtRPS3 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os12g34124.1 LOC_Os12g34124 component mtRPS3 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g01174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g05170.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g22008 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g61975 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g08984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11330 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!