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  5. Cba_g78677

Cba_g78677 (SYP123, ATSYP123)


Aliases : SYP123, ATSYP123

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g78677

Target Alias Description ECC score Gene Family Method Actions
Als_g02333 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g34924 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os02g11890.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Mp2g19600.1 SYP132, ATSYP132 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012994 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Smo93442 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 123 325
IPR000727 T_SNARE_dom 326 378
No external refs found!