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  5. Cba_g78284

Cba_g78284 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g78284

Target Alias Description ECC score Gene Family Method Actions
AT2G18280 TLP2, AtTLP2 tubby like protein 2 0.02 OrthoFinder output from all 47 species
Adi_g080078 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037176 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47640.1 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Ore_g09550 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42650 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22304 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e015581_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 159 452
IPR001810 F-box_dom 59 105
No external refs found!