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  5. Cba_g78022

Cba_g78022


Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g78022
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT2G27710 No alias 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
AT2G27720 No alias 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
Adi_g127327 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aev_g46560 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g18468 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g17968 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g30341 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g32873 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g34747 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g38199 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cba_g39857 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre02.g143050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g21984 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g16099 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g18589 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01033814001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
MA_177584g0010 No alias component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_8598039g0010 No alias component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g08160.1 No alias component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Nbi_g21745 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Nbi_g22542 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g37802 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g42560 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pnu_g33886 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_27060V3.1 Pp3c1_27060 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Ppi_g10605 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Ppi_g21216 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g26758 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g27556 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ppi_g27557 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g44489 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g53009 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Smo139397 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc01g009447.1.1 Solyc01g009447 component RPP2 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g074430.4.1 Solyc06g074430 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc07g007880.1.1 Solyc07g007880 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc11g067100.2.1 Solyc11g067100 component RPP2 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g37475 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e006597_P001 Zm00001e006597 component RPP2 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e026591_P001 Zm00001e026591 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e026592_P001 Zm00001e026592 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e026593_P001 Zm00001e026593 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e041900_P001 Zm00001e041900 component RPP2 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!