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  5. Cba_g77936

Cba_g77936 (ATNFXL1, NFXL1)


Aliases : ATNFXL1, NFXL1

Description : transcriptional repressor *(NF-X1) & original description: none


Gene families : OG0006722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006722_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g77936

Target Alias Description ECC score Gene Family Method Actions
Dac_g10965 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06254 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g66332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008189 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 714 731
IPR000967 Znf_NFX1 877 893
IPR000967 Znf_NFX1 781 792
IPR000967 Znf_NFX1 650 667
IPR000967 Znf_NFX1 924 945
IPR000967 Znf_NFX1 532 547
IPR000967 Znf_NFX1 820 837
IPR000967 Znf_NFX1 586 603
No external refs found!