Cba_g77174


Description : not classified & original description: none


Gene families : OG0002863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002863_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g77174

Target Alias Description ECC score Gene Family Method Actions
Adi_g014832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26523 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06090 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.02 OrthoFinder output from all 47 species
Cba_g06913 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28691 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 99 145
IPR002885 Pentatricopeptide_repeat 1 43
IPR002885 Pentatricopeptide_repeat 70 95
IPR002885 Pentatricopeptide_repeat 172 187
No external refs found!