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  5. Cba_g76778

Cba_g76778


Description : not classified & original description: none


Gene families : OG0014978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g76778

Target Alias Description ECC score Gene Family Method Actions
Dac_g07797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 339 363
IPR002885 Pentatricopeptide_repeat 643 666
IPR002885 Pentatricopeptide_repeat 843 866
IPR002885 Pentatricopeptide_repeat 262 310
IPR002885 Pentatricopeptide_repeat 771 815
IPR002885 Pentatricopeptide_repeat 364 410
IPR002885 Pentatricopeptide_repeat 464 512
IPR002885 Pentatricopeptide_repeat 667 712
IPR002885 Pentatricopeptide_repeat 565 613
No external refs found!