1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g38310

Lfl_g38310


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g38310
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00141260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00107p00122980 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT1G19170 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G23900 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G06770 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16850 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G23820 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G41870 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g044640 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110576 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32626 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g43887 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07714 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13749 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18890 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20386 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Als_g11539 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20477 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03798 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11182 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29798 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32714 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G023500.1 Ceric.09G023500 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G027000.1 Ceric.37G027000 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02823 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05796 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07520 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07611 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09567 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10127 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14122 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17762 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.01 OrthoFinder output from all 47 species
Gb_06212 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os01g43160.1 LOC_Os01g43160 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54030.1 LOC_Os02g54030 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61800.2 LOC_Os03g61800 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
LOC_Os05g50960.1 LOC_Os05g50960 Probable polygalacturonase OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
LOC_Os11g43750.1 LOC_Os11g43750 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
LOC_Os12g36810.1 LOC_Os12g36810 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Len_g07468 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09858 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38938 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40756 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_12554g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_88519g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_9467735g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_98717g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Msp_g06926 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08216 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31187 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06175 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09024 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40127 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18430 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18897 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43812 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16806 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10961 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18141 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48471 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61919 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25453 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g049980.3.1 Solyc05g049980 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc06g009790.4.1 Solyc06g009790 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc07g042160.3.1 Solyc07g042160 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc08g081480.3.1 Solyc08g081480 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Spa_g06310 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14594 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39269 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47091 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51753 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51754 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11741 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24209 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006249_P001 Zm00001e006249 Probable polygalacturonase OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
Zm00001e021051_P001 Zm00001e021051 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e023760_P001 Zm00001e023760 Probable polygalacturonase OS=Vitis vinifera... 0.06 OrthoFinder output from all 47 species
Zm00001e024829_P001 Zm00001e024829 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e026646_P002 Zm00001e026646 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029809_P002 Zm00001e029809 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e039674_P002 Zm00001e039674 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 169 453
No external refs found!