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  5. Cba_g76179

Cba_g76179


Description : not classified & original description: none


Gene families : OG0001143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g76179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00226190 VEL1, VIL2,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Adi_g084115 VIN3 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Als_g39230 VIN3 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Als_g46672 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Ceric.30G057100.1 VEL1, VIL2,... PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Dcu_g22153 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
GSVIVT01009187001 VEL1, VIL2 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
LOC_Os02g05840.1 VEL1, VIL2,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.02 OrthoFinder output from all 47 species
LOC_Os12g34850.1 VIL1, VRN5,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.01 OrthoFinder output from all 47 species
Len_g11565 VEL1, VIL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_55622g0010 VEL1, VIL2 PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.02 OrthoFinder output from all 47 species
Ore_g31589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009640 VIL1, VRN5 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Spa_g26243 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Spa_g51904 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Zm00001e018303_P001 VIL1, VRN5,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.02 OrthoFinder output from all 47 species
Zm00001e025209_P001 VEL1, VIL2,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.02 OrthoFinder output from all 47 species
Zm00001e040024_P001 VEL1, VIL2,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!