Cba_g75864

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g75864
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
Ala_g24708	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene63093.t1	Aspi01Gene63093	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0109.g045336	No alias	pectin methylesterase & original description: CDS=343-1428	0.04	OrthoFinder output from all 47 species
Ceric.13G037500.1	Ceric.13G037500	pectin methylesterase & original description:...	0.05	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Ore_g31394	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g38524	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950	No alias	pectin methylesterase & original description: CDS=716-1846	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005949	No alias	pectin methylesterase & original description: CDS=175-1425	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880	No alias	pectin methylesterase & original description: CDS=354-1487	0.03	OrthoFinder output from all 47 species
Solyc09g091730.4.1	Solyc09g091730	pectin methylesterase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	23	197

External Links

No external refs found!