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  5. Cba_g75677

Cba_g75677


Description : not classified & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75677
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Als_g63594 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
LOC_Os09g27930.1 LOC_Os09g27930 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g15041 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
MA_8884419g0010 No alias component RPS27a of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g48388 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32597 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g20546 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g27133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 71
No external refs found!