Cba_g75405


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75405
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Adi_g012573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g018230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018518 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11282 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11380 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23943 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07428 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18223 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30421 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30893 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07596 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67030 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.02G037400.1 Ceric.02G037400 not classified & original description: pacid=50584425... 0.03 OrthoFinder output from all 47 species
Ceric.03G030900.1 CRR22, Ceric.03G030900 not classified & original description: pacid=50573050... 0.05 OrthoFinder output from all 47 species
Ceric.05G020600.1 Ceric.05G020600 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.09G002900.1 Ceric.09G002900 not classified & original description: pacid=50586532... 0.03 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.03 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.03 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G038700.1 Ceric.14G038700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G076500.1 Ceric.14G076500 not classified & original description: pacid=50633826... 0.03 OrthoFinder output from all 47 species
Ceric.15G076300.1 Ceric.15G076300 not classified & original description: pacid=50639367... 0.03 OrthoFinder output from all 47 species
Ceric.16G006400.1 Ceric.16G006400 not classified & original description: pacid=50590241... 0.03 OrthoFinder output from all 47 species
Ceric.17G052300.1 Ceric.17G052300 not classified & original description: pacid=50618191... 0.04 OrthoFinder output from all 47 species
Ceric.17G075500.1 Ceric.17G075500 not classified & original description: pacid=50617952... 0.04 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.05 OrthoFinder output from all 47 species
Ceric.23G005700.1 Ceric.23G005700 not classified & original description: pacid=50611427... 0.03 OrthoFinder output from all 47 species
Ceric.23G026100.1 Ceric.23G026100 not classified & original description: pacid=50611257... 0.04 OrthoFinder output from all 47 species
Ceric.23G032200.1 Ceric.23G032200 not classified & original description: pacid=50610511... 0.03 OrthoFinder output from all 47 species
Ceric.25G001500.1 Ceric.25G001500 not classified & original description: pacid=50593180... 0.03 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g13741 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18170 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47619 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g51968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22449 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05014 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01227 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05241 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24319 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25213 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05641 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15348 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45103 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000758 No alias not classified & original description: CDS=443-4012 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007863 No alias not classified & original description: CDS=1-2721 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013947 No alias not classified & original description: CDS=131-3355 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025828 No alias not classified & original description: CDS=1-3132 0.03 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25854 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04732 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08688 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12894 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15075 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 329 358
IPR002885 Pentatricopeptide_repeat 301 326
IPR002885 Pentatricopeptide_repeat 134 156
IPR002885 Pentatricopeptide_repeat 561 607
IPR002885 Pentatricopeptide_repeat 444 490
IPR002885 Pentatricopeptide_repeat 778 825
IPR002885 Pentatricopeptide_repeat 677 725
IPR002885 Pentatricopeptide_repeat 226 272
No external refs found!