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  5. Cba_g75400

Cba_g75400


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75400

Target Alias Description ECC score Gene Family Method Actions
Ala_g28513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33541 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0083.g038880 No alias not classified & original description: CDS=1-2250 0.09 OrthoFinder output from all 47 species
Cba_g04075 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g18613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05357 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10358 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53918 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12229 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14606 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16324 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g20166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22684 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28099 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50395 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06093 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13649 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19787 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23253 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 202 224
IPR002885 Pentatricopeptide_repeat 303 326
IPR032867 DYW_dom 642 732
IPR002885 Pentatricopeptide_repeat 228 274
IPR002885 Pentatricopeptide_repeat 130 177
IPR002885 Pentatricopeptide_repeat 329 375
IPR002885 Pentatricopeptide_repeat 429 477
IPR046848 E_motif 548 609
No external refs found!