1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g75374

Cba_g75374 (VAR2, FTSH2)


Aliases : VAR2, FTSH2

Description : EXECUTER-cleavage protease *(FtsH2) & original description: none


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75374

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00108310 VAR2, FTSH2,... Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
AT1G06430 FTSH8 FTSH protease 8 0.02 OrthoFinder output from all 47 species
AT3G02450 No alias cell division protein ftsH, putative 0.02 OrthoFinder output from all 47 species
Adi_g087056 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Adi_g087057 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Aev_g02360 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Ala_g14174 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Als_g07586 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Als_g20560 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Aob_g10132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17362 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Aop_g14163 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Aspi01Gene12384.t1 FTSH8, Aspi01Gene12384 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Aspi01Gene18386.t1 FTSH8, Aspi01Gene18386 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016135 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Ceric.03G093200.1 FTSH8, Ceric.03G093200 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Ceric.22G054100.1 FTSH8, Ceric.22G054100 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
Cre17.g720050 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.08 OrthoFinder output from all 47 species
Dac_g10534 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Dcu_g13134 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Dcu_g44210 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Dde_g23743 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Ehy_g03938 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
GSVIVT01020760001 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.07 OrthoFinder output from all 47 species
Gb_12830 FTSH8 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.08 OrthoFinder output from all 47 species
LOC_Os06g45820.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 OrthoFinder output from all 47 species
Len_g21745 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Len_g44862 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Lfl_g04989 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Mp4g19200.1 VAR2, FTSH2 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species
Msp_g02086 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Nbi_g11426 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Nbi_g34642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26838 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Ore_g45571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09681 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Ppi_g17712 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008575 FTSH8 not classified & original description: CDS=1-1161 0.05 OrthoFinder output from all 47 species
Sam_g18762 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Sam_g37450 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Smo149856 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
Smo152929 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Solyc07g055320.4.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 OrthoFinder output from all 47 species
Spa_g04708 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Spa_g25819 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Tin_g04117 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Zm00001e030358_P003 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.09 OrthoFinder output from all 47 species
Zm00001e037753_P001 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 261 392
No external refs found!