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  5. Cba_g75134

Cba_g75134


Description : not classified & original description: none


Gene families : OG0012030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75134

Target Alias Description ECC score Gene Family Method Actions
Ala_g04962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0004.g008767 CRR22 not classified & original description: CDS=88-2217 0.03 OrthoFinder output from all 47 species
Ceric.31G060600.1 Ceric.31G060600 not classified & original description: pacid=50574962... 0.02 OrthoFinder output from all 47 species
Pir_g17188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 702 749
IPR002885 Pentatricopeptide_repeat 802 849
IPR002885 Pentatricopeptide_repeat 600 647
IPR002885 Pentatricopeptide_repeat 399 447
IPR002885 Pentatricopeptide_repeat 777 799
IPR002885 Pentatricopeptide_repeat 673 698
IPR002885 Pentatricopeptide_repeat 475 499
No external refs found!