Cba_g75130


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75130

Target Alias Description ECC score Gene Family Method Actions
Adi_g003294 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005632 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008293 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28460 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10785 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23810 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28209 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13134 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02464.t1 Aspi01Gene02464 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02798.t1 Aspi01Gene02798 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10264.t1 Aspi01Gene10264 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34811.t1 Aspi01Gene34811 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43278.t1 Aspi01Gene43278 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48516.t1 Aspi01Gene48516 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54997.t1 CRK8, Aspi01Gene54997 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67320.t1 EMB2758, Aspi01Gene67320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.02 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g47996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68945 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.02 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.03 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28223 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35075 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43220 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40968 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.01 OrthoFinder output from all 47 species
Len_g03252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05451 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17734 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18438 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25604 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33296 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15159 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26265 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20147 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60394 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63861 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006276 No alias not classified & original description: CDS=1-1806 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010805 VAC1, ECB2, ATECB2 not classified & original description: CDS=294-2756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021987 No alias not classified & original description: CDS=1-1590 0.03 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04965 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 415 462
IPR002885 Pentatricopeptide_repeat 213 259
IPR002885 Pentatricopeptide_repeat 313 361
IPR002885 Pentatricopeptide_repeat 118 147
IPR002885 Pentatricopeptide_repeat 187 211
IPR002885 Pentatricopeptide_repeat 591 612
IPR002885 Pentatricopeptide_repeat 288 311
IPR002885 Pentatricopeptide_repeat 518 548
IPR002885 Pentatricopeptide_repeat 555 581
IPR002885 Pentatricopeptide_repeat 389 410
No external refs found!