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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G25360 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G47580 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g034274 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09730 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g22656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g34015 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36013 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05094 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19077 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54166 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04000 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16691 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g35556 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g43404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008304 | OTP84 | not classified & original description: CDS=1-2247 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0383.g067429 | No alias | not classified & original description: CDS=1-1644 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0544.g076391 | No alias | not classified & original description: CDS=1-906 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s4087.g117953 | CRR22 | not classified & original description: CDS=1-597 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35519 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44924 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75350 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G036100.1 | VAC1, ECB2,... | not classified & original description: pacid=50578170... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G077000.1 | EMB2261, Ceric.15G077000 | not classified & original description: pacid=50639459... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G015100.1 | Ceric.28G015100 | not classified & original description: pacid=50570923... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G075100.1 | Ceric.30G075100 | not classified & original description: pacid=50609517... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07600 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g10089 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14626 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36025 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g45110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21668 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26380 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18295 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g43892 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g41072 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13610 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g33976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13249 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13363 | MEF22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13622 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19172 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23074 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05803 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07547 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11120 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15400 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g35833 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g39734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53191 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53202 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003219 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1521 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023175 | No alias | not classified & original description: CDS=1-2640 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48925 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo98551 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g19369 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28119 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55587 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55658 | MEF19 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56147 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14539 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23253 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0120227 | acyl-CoA binding | IEP | HCCA |
| MF | GO:1901567 | fatty acid derivative binding | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 224 | 270 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 169 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 372 |
| IPR002885 | Pentatricopeptide_repeat | 299 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 97 | 119 |
| IPR002885 | Pentatricopeptide_repeat | 399 | 424 |
| No external refs found! |