Lfl_g38053


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g38053

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G05430 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G27860 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g04183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G012100.1 Ceric.04G012100 not classified & original description: pacid=50630823... 0.03 OrthoFinder output from all 47 species
Ceric.29G059500.1 Ceric.29G059500 N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_11632 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g19810.1 LOC_Os11g19810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10171844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!