MA_230261g0010


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_230261g0010
Cluster HCCA cluster: Cluster_488

Target Alias Description ECC score Gene Family Method Actions
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Gene family
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01011333001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01017075001 No alias No description available 0.07 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os01g62910 Os01g0848300 No description available 0.02 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_100287g0010 No alias No description available 0.03 Gene family
MA_10164206g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_10426261g0020 No alias No description available 0.08 Gene family
MA_104937g0010 No alias No description available 0.12 Gene family
MA_1109g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
MA_112849g0010 No alias No description available 0.03 Gene family
MA_136188g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_140591g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_17949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
MA_20599g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
MA_20622g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_27147g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_33151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
MA_519985g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_73895g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.11 Gene family
MA_8210920g0010 No alias No description available 0.06 Gene family
MA_83898g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_9258g0010 No alias No description available 0.05 Gene family
Smo105776 PACid_15417271 No description available 0.08 Gene family
Smo30579 PACid_15414938 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Smo82024 PACid_15407991 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g081560.2.1 Solyc01g081560.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc02g081900.3.1 Solyc02g081900.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Solyc03g111210.3.1 Solyc03g111210.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc11g008940.1.1 Solyc11g008940.1 No description available 0.02 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.02 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d021411 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d037891 No alias No description available 0.03 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 627 648
IPR002885 Pentatricopeptide_repeat 599 624
IPR002885 Pentatricopeptide_repeat 195 220
IPR002885 Pentatricopeptide_repeat 527 555
IPR002885 Pentatricopeptide_repeat 800 824
IPR002885 Pentatricopeptide_repeat 223 253
IPR032867 DYW_dom 899 1019
IPR002885 Pentatricopeptide_repeat 85 117
IPR002885 Pentatricopeptide_repeat 322 369
IPR002885 Pentatricopeptide_repeat 726 773
IPR002885 Pentatricopeptide_repeat 422 470
IPR002885 Pentatricopeptide_repeat 120 167
No external refs found!