Gb_05004


Description : Probable E3 ubiquitin-protein ligase RHA1A OS=Arabidopsis thaliana (sp|q9sus4|rha1a_arath : 84.3)


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000175 (LandPlants) Phylogenetic Tree(s): OG_02_0000175_tree ,
OG_03_0000116 (SeedPlants) Phylogenetic Tree(s): OG_03_0000116_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05004
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.02 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G47560 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.03 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01016564001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.04 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10436104g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_105610g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_169947g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
MA_2639751g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_393170g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43248g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_465316g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_611616g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_73524g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_754688g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8338g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9515738g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp4g15970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_20780V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g007500.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e009142_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015796_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT1G67856 No alias RING/U-box superfamily protein 0.02 LandPlants
AT3G43430 No alias RING/U-box superfamily protein 0.02 LandPlants
AT4G00305 No alias RING/U-box superfamily protein 0.03 LandPlants
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_10145129g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_133839g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_169947g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 LandPlants
MA_201391g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 LandPlants
MA_7120568g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp4g15970.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e008560_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e023238_P001 No alias no hits & (original description: none) 0.03 LandPlants
AT1G67856 No alias RING/U-box superfamily protein 0.02 SeedPlants
AT3G43430 No alias RING/U-box superfamily protein 0.02 SeedPlants
AT4G00305 No alias RING/U-box superfamily protein 0.02 SeedPlants
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.01 SeedPlants
MA_10145129g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_133839g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_7120568g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e023238_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 229 273
No external refs found!