Cba_g71707 (CSB3, CLB4, GCPE, HDS, ISPG)

Aliases : CSB3, CLB4, GCPE, HDS, ISPG

Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase & original description: none

Gene families : OG0004404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004404_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g71707
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00175p00057810	CSB3, CLB4,...	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder output from all 47 species
Aop_g14403	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.03	OrthoFinder output from all 47 species
Lfl_g05647	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.02	OrthoFinder output from all 47 species
Nbi_g10591	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.03	OrthoFinder output from all 47 species
Sam_g28197	No alias	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.03	OrthoFinder output from all 47 species
Smo149035	CSB3, CLB4,...	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	IEA	Interproscan
MF	GO:0052592	oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004588	IspG_bac-typ	88	234

External Links

No external refs found!