Lfl_g37795 (SCN1)

Aliases : SCN1

Description : guanine nucleotide dissociation inhibitor *(RopGDI) & original description: none

Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g37795
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00173830	SCN1,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
AMTR_s00067p00174290	SCN1,...	Multi-process regulation.Rop GTPase regulatory...	0.02	OrthoFinder output from all 47 species
Ala_g16981	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.04	OrthoFinder output from all 47 species
Dde_g13147	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Dde_g51936	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01031620001	SCN1	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
Gb_39963	SCN1	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species
LOC_Os01g68540.1	SCN1, LOC_Os01g68540	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species
LOC_Os02g48730.1	SCN1, LOC_Os02g48730	guanine nucleotide dissociation inhibitor (RopGDI)	0.04	OrthoFinder output from all 47 species
LOC_Os06g21340.1	SCN1, LOC_Os06g21340	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species
Lfl_g38013	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.04	OrthoFinder output from all 47 species
Msp_g21563	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.05	OrthoFinder output from all 47 species
Msp_g39473	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Ppi_g00513	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011233	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Sam_g08474	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.04	OrthoFinder output from all 47 species
Sam_g25794	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Sam_g50701	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Tin_g28325	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.06	OrthoFinder output from all 47 species
Zm00001e027138_P001	SCN1, Zm00001e027138	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species
Zm00001e027139_P001	SCN1, Zm00001e027139	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	None	Extended
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	None	Extended
BP	GO:0007265	Ras protein signal transduction	None	Extended
BP	GO:0007266	Rho protein signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000406	Rho_GDI	81	275

External Links

No external refs found!

Lfl_g37795 (SCN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation