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  5. Cba_g68684

Cba_g68684


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g68684

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00105p00126340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G02075 PIT1 RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g023570 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09799 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17220 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g00919 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39862 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433939g0010 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Pnu_g33416 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09771 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28055 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025697_P001 Zm00001e025697 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e028572_P001 Zm00001e028572 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 97 142
IPR022143 DUF3675 209 304
No external refs found!