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  5. Cba_g67891

Cba_g67891 (CDC48A, CDC48, ATCDC48)


Aliases : CDC48A, CDC48, ATCDC48

Description : platform ATPase CDC48 & original description: none


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00071550 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.02 OrthoFinder output from all 47 species
AT3G53230 No alias ATPase, AAA-type, CDC48 protein 0.03 OrthoFinder output from all 47 species
AT5G03340 No alias ATPase, AAA-type, CDC48 protein 0.03 OrthoFinder output from all 47 species
Azfi_s0178.g056166 No alias platform ATPase CDC48 & original description: CDS=301-2751 0.02 OrthoFinder output from all 47 species
Azfi_s0210.g058064 No alias platform ATPase CDC48 & original description: CDS=1-2484 0.04 OrthoFinder output from all 47 species
Dac_g04710 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025723001 No alias Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
MA_10168585g0010 No alias platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species
Mp1g25630.1 No alias platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species
Msp_g19399 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003606 CDC48B not classified & original description: CDS=1-618 0.02 OrthoFinder output from all 47 species
Spa_g02118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012761_P001 Zm00001e012761 platform ATPase (CDC48) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR015415 Vps4_C 676 717
IPR003338 CDC4_N-term_subdom 2 64
IPR003959 ATPase_AAA_core 198 327
IPR003959 ATPase_AAA_core 471 604
IPR041569 AAA_lid_3 350 392
IPR041569 AAA_lid_3 626 666
IPR004201 Cdc48_dom2 85 147
No external refs found!